pOR10 pBAD>+yfp+pCONST>+araC Lara yfp [A Tamsir et al] [Robust multicellular computing using genetically encoded NOR gates and chemical wires] Nature 2011 pOR20 pTET>+yfp+pCONST>+tetR aTc yfp [A Tamsir et al] [Robust multicellular computing using genetically encoded NOR gates and chemical wires] Nature 2011 pOR30 pLAS>+yfp+pCONST>+lasR HSL yfp [A Tamsir et al] [Robust multicellular computing using genetically encoded NOR gates and chemical wires] Nature 2011 pOR1020 pBADpTET>+yfp+pCONST>+araC+tetR Lara,aTc yfp [A Tamsir et al] [Robust multicellular computing using genetically encoded NOR gates and chemical wires] Nature 2011 pOR1030 pBADpLAS>+yfp+pCONST>+araC+lasR Lara,HSL yfp [A Tamsir et al] [Robust multicellular computing using genetically encoded NOR gates and chemical wires] Nature 2011 pOR2030 pTETpLAS>+yfp+pCONST>+lasR+tetR HSL,aTc yfp [A Tamsir et al] [Robust multicellular computing using genetically encoded NOR gates and chemical wires] Nature 2011 pNOR1020 pBADpTET>+cI+pCONST>+araC+tetR Lara,aTc cI [A Tamsir et al] [Robust multicellular computing using genetically encoded NOR gates and chemical wires] Nature 2011 pNOR1030 pBADpLAS>+cI+pCONST>+araC+lasR Lara,HSL cI [A Tamsir et al] [Robust multicellular computing using genetically encoded NOR gates and chemical wires] Nature 2011 pNOR2030 pTETpLAS>+cI+pCONST>+lasR+tetR HSL,aTc cI [A Tamsir et al] [Robust multicellular computing using genetically encoded NOR gates and chemical wires] Nature 2011 pNOR40 pRHL>+cI+pCONST>+rhlR C4HSL cI [A Tamsir et al] [Robust multicellular computing using genetically encoded NOR gates and chemical wires] Nature 2011 pPcI-yfp pLAMBDA>+yfp cI yfp [A Tamsir et al] [Robust multicellular computing using genetically encoded NOR gates and chemical wires] Nature 2011 pcI-lasI pLAMBDA>+lasI cI HSL [A Tamsir et al] [Robust multicellular computing using genetically encoded NOR gates and chemical wires] Nature 2011 pcI-rhlI pLAMBDA>+rhlI cI C4HSL [A Tamsir et al] [Robust multicellular computing using genetically encoded NOR gates and chemical wires] Nature 2011 pBW10xlac-gfp pLAC>+gfp+pCONST>+lacI IPTG gfp [B Wang et al] [Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology] [Nature communications] 2011 pBW20xara-gfp araC+pCONST<+pBAD>+gfp Lara gfp [B Wang et al] [Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology] [Nature communications] 2011 pBW30xlux-gfp pTET>+luxR+pLUX>+gfp AHL gfp [B Wang et al] [Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology] [Nature communications] 2011 pBW115lac-hrpR pLAC>+hrpR+pCONST>+lacI IPTG hrpR [B Wang et al] [Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology] [Nature communications] 2011 pBW213ara-hrpS araC+pCONST<+pBAD>+hrpS Lara hrpS [B Wang et al] [Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology] [Nature communications] 2011 pBW313lux-hrpR pTET>+luxR+pLUX>+hrpR AHL hrpR [B Wang et al] [Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology] [Nature communications] 2011 PBW12xlac-cIgfp pLAC>+cI+pLAMBDA>+gfp+pCONST>+lacI IPTG gfp [B Wang et al] [Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology] [Nature communications] 2011 pBW400hrpL-gfp phrpL>+gfp hrpR,hrpS gfp [B Wang et al] [Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology] [Nature communications] 2011 PBW412hrpL-cIgfp phrpL>+cI+pLAMBDA>+gfp hrpR,hrpS gfp [B Wang et al] [Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology] [Nature communications] 2011 pSupDLuxR luxR+pCONST<+pLUX>+supD AHL supD [JC Anderson et al] [Environmental signal integration by a modular AND gate] [Molecular Systems Biology] 2007 pAC-SalSer914 nahR+pCONST<+pSAL>+supD Sal supD [JC Anderson et al] [Environmental signal integration by a modular AND gate] [Molecular Systems Biology] 2007 pBAC874t pTET>+gfp tetR gfp [JC Anderson et al] [Environmental signal integration by a modular AND gate] [Molecular Systems Biology] 2007 pBACxxx araC+pCONST<+pBAD>+gfp Lara gfp [JC Anderson et al] [Environmental signal integration by a modular AND gate] [Molecular Systems Biology] 2007 pBACr-Mgr901 pmgrB>+gfp Mg2+ gfp [JC Anderson et al] [Environmental signal integration by a modular AND gate] [Molecular Systems Biology] 2007 pBACr-AraT7940 araC+pCONST<+pBAD>+T7ptag Lara T7ptag [JC Anderson et al] [Environmental signal integration by a modular AND gate] [Molecular Systems Biology] 2007 pBACr-Mgr940 pmgrB>+T7ptag Mg2+ T7ptag [JC Anderson et al] [Environmental signal integration by a modular AND gate] [Molecular Systems Biology] 2007 pBACr-Mgr951 pT7>+gfp+pmgrB>+T7ptag Mg2+,supD gfp [JC Anderson et al] [Environmental signal integration by a modular AND gate] [Molecular Systems Biology] 2007 pBR939B pT7>+gfp T7ptag,supD gfp [JC Anderson et al] [Environmental signal integration by a modular AND gate] [Molecular Systems Biology] 2007 pFNK-202-eyfp-qscxxx rhlR+pCONST<+pRHL>+yfp C4HSL yfp [D Karig et al] [Signal-Amplifying Genetic Circuit Enables In Vivo Observation of Weak Promoter Activation in the Rhl Quorum Sensing System] [Biotechnology and bioengineering] 2005 pMUX-204-qscxxx rhlR+pCONST<+pRHL>+cI C4HSL cI [D Karig et al] [Signal-Amplifying Genetic Circuit Enables In Vivo Observation of Weak Promoter Activation in the Rhl Quorum Sensing System] [Biotechnology and bioengineering] 2005 pINV-107-mutx pLAMBDA>+yfp cI yfp [D Karig et al] [Signal-Amplifying Genetic Circuit Enables In Vivo Observation of Weak Promoter Activation in the Rhl Quorum Sensing System] [Biotechnology and bioengineering] 2005 pLD pLUX>+cI+pLAMBDA>+lacI luxR,AHL lacI [S Basu et al] [A synthetic multicelluar system for programmed pattern formation] Nature 2004 pSND pTET>+luxI EMPTY AHL [S Basu et al] [A synthetic multicelluar system for programmed pattern formation] Nature 2004 pHD-gfp lacI+pLUX<+pCONST>+luxR+pLAC>+gfp AHL gfp [S Basu et al] [A synthetic multicelluar system for programmed pattern formation] Nature 2004 pHD-rfp lacI+pLUX<+pCONST>+luxR+pLAC>+rfp AHL rfp [S Basu et al] [A synthetic multicelluar system for programmed pattern formation] Nature 2004 pCFP lacI+pCONST<+pLAC>+cfp IPTG cfp [S Basu et al] [A synthetic multicelluar system for programmed pattern formation] Nature 2004 pRFP lacI+pCONST<+pLAC>+rfp IPTG rfp [S Basu et al] [A synthetic multicelluar system for programmed pattern formation] Nature 2004 pMKN7a pLAC>+gfp lacI gfp [TS Gardner et al] [Construction of a genetic toggle switch in Escherichia coli] Nature 2000 pBAG10x pTET>+gfp tetR gfp [TS Gardner et al] [Construction of a genetic toggle switch in Escherichia coli] Nature 2000 pBRTxxx pLAMBDA>+gfp cI gfp [TS Gardner et al] [Construction of a genetic toggle switch in Escherichia coli] Nature 2000 pTAK102-103a lacI+pLAMBDA<+pLAC>+gfp cI gfp [TS Gardner et al] [Construction of a genetic toggle switch in Escherichia coli] Nature 2000 pTAK106-107 gfp+pLAMBDA<+pLAC>+cI lacI gfp [TS Gardner et al] [Construction of a genetic toggle switch in Escherichia coli] Nature 2000 pIKE108-110 gfp+pTET<+pLAC>+tetR lacI gfp [TS Gardner et al] [Construction of a genetic toggle switch in Escherichia coli] Nature 2000 pTAK117-132 lacI+pLAMBDA<+pLAC>+cI+gfp IPTG gfp [TS Gardner et al] [Construction of a genetic toggle switch in Escherichia coli] Nature 2000 pIKE107 lacI+pTET<+pLAC>+tetR+gfp IPTG,aTc gfp [TS Gardner et al] [Construction of a genetic toggle switch in Escherichia coli] Nature 2000 pJS167 pLAC/BAD>+araC+pLAC/BAD>+gfp lacI,Lara gfp [J Stricker et al] [A fast, robust and tunable synthetic gene oscillator] Nature 2008 pJS169 pLAC/BAD>+lacI lacI,Lara,araC lacI [J Stricker et al] [A fast, robust and tunable synthetic gene oscillator] Nature 2008 BBa_F2620 pTET>+luxR+pLUX> AHL pLUX [B Canton et al] [Refinement and standardization of synthetic biological parts and devices] [Nature Biotechnology] 2008 pJT108 pompC>+lacZ LIGHT lacZ [JJ Tabor et al] [A Synthetic Genetic Edge Detection Program] Cell 2009 pJT105 pLUX/LAMBDA>+lacZ+pompC>+luxI+pTET>+luxR LIGHT,cI lacZ [JJ Tabor et al] [A Synthetic Genetic Edge Detection Program] Cell 2009 pJT106 pLUX/LAMBDA>+lacZ+pompC>+cI LIGHT lacZ [JJ Tabor et al] [A Synthetic Genetic Edge Detection Program] Cell 2009 pEDL3 pLUX/LAMBDA>+lacZ+pompC>+cI+luxI+pTET>+luxR LIGHT lacZ [JJ Tabor et al] [A Synthetic Genetic Edge Detection Program] Cell 2009 pLuxRI2 pLAC/BAD>+luxR+luxI EMPTY AHL-luxR [L You et al] [Programmed population control by cell–cell communication and regulated killing] Nature 2004 pluxCcdB3 pLUX>+lacZalpha-ccdB AHL,luxR lacZalpha-ccdB [L You et al] [Programmed population control by cell–cell communication and regulated killing] Nature 2004 predator1-MG1655 ccdA+pLUX<+pTET>+luxR+lasI AHL ccdA [FK Balagadde et al] [A synthetic Escherichia coli predator–prey ecosystem] [Molecular Systems Biology] 2008 predator2-MG1655 pLAC/BAD>+lacZalpha-ccdB+pTET>+gfp EMPTY lacZalpha-ccdB,gfp [FK Balagadde et al] [A synthetic Escherichia coli predator–prey ecosystem] [Molecular Systems Biology] 2008 prey1-Top10F lacZalpha-ccdB+pLUX<+pLAC/BAD>+lasR+luxI HSL lacZalpha-ccdB [FK Balagadde et al] [A synthetic Escherichia coli predator–prey ecosystem] [Molecular Systems Biology] 2008 prey2-Top10F pTET>+gfp tetR gfp [FK Balagadde et al] [A synthetic Escherichia coli predator–prey ecosystem] [Molecular Systems Biology] 2008 predator-Top10F pLAC/BAD>+lacZalpha-ccdB EMPTY lacZalpha-ccdB [FK Balagadde et al] [A synthetic Escherichia coli predator–prey ecosystem] [Molecular Systems Biology] 2008 pBR322-ptrc-lexA pCONST>+lacI+pLAC>+lexA IPTG,nalidixic-acid lexA [RS Rocha et al] [Implementing an OR –NOT (ORN) logic gate with components of the SOS regulatory network of Escherichia coli] [Molecular BioSystems] 2011 pRV2-SOS pSOS>+gfp lexA gfp [RS Rocha et al] [Implementing an OR –NOT (ORN) logic gate with components of the SOS regulatory network of Escherichia coli] [Molecular BioSystems] 2011 pZE21-MCSI-pZE12-luc pLAC>+tetR+pLAMBDA>+lacI+pTET>+cI EMPTY EMPTY [MB Elowitz et al] [A synthetic oscillatory network of transcriptional regulators] Nature 2000 pZE21-MCS1-gfp pTET>+gfp tetR gfp [MB Elowitz et al] [A synthetic oscillatory network of transcriptional regulators] Nature 2000 PLuxI-Tet-8 pTET>+luxI EMPTY AHL [S Basu et al] [Spatiotemporal control of gene expression with pulse-generating networks] PNAS 2004 pLTSUB-202-RBSH luxR+pCONST<+pLUX>+cI+cfp AHL cfp [S Basu et al] [Spatiotemporal control of gene expression with pulse-generating networks] PNAS 2004 pPSSUB-101-mut4 pLUX/LAMBDA>+gfp AHL,luxR,cI gfp [S Basu et al] [Spatiotemporal control of gene expression with pulse-generating networks] PNAS 2004 pCRT1 pCONST>+tetR+pTET>+yfp aTc yfp [S Hooshangi et al] [Ultrasensitivity and noise propagation in a synthetic transcriptional cascade] PNAS 2004 pCRT2 pCONST>+tetR+pTET>+lacI+pLAC>+yfp aTc yfp [S Hooshangi et al] [Ultrasensitivity and noise propagation in a synthetic transcriptional cascade] PNAS 2004 pCRT3 pCONST>+tetR+pTET>+lacI+pLAC>+cI+pLAMBDA>+yfp aTc yfp [S Hooshangi et al] [Ultrasensitivity and noise propagation in a synthetic transcriptional cascade] PNAS 2004 pTara:500 araC+pCONST<+pBAD>+T7 Lara T7 [Shis, D. L., & Bennett, M. R.] [Library of synthetic transcriptional AND gates built with split T7 RNA polymerase mutants] PNAS 2013 pTSara-N araC+pCONST<+pBAD>+T7-N Lara T7-N [Shis, D. L., & Bennett, M. R.] [Library of synthetic transcriptional AND gates built with split T7 RNA polymerase mutants] PNAS 2013 pTSara-C araC+pCONST<+pBAD>+T7-C Lara T7-C [Shis, D. L., & Bennett, M. R.] [Library of synthetic transcriptional AND gates built with split T7 RNA polymerase mutants] PNAS 2013 pTSlb T7-N+pLAC<+pBAD>+T7-C lacI,Lara-araC T7-C-T7-N [Shis, D. L., & Bennett, M. R.] [Library of synthetic transcriptional AND gates built with split T7 RNA polymerase mutants] PNAS 2013 pET:NNNN:GFP gfp+pT7<+pCONST>+lacI T7-C-T7-N gfp,lacI [Shis, D. L., & Bennett, M. R.] [Library of synthetic transcriptional AND gates built with split T7 RNA polymerase mutants] PNAS 2013 PluxI-lacO-GFPmut2 pLUX/LAC>+gfp lacI,AHL-luxR gfp [DJ Sayut et al] [Construction and enhancement of a minimal genetic and logic gate] [Appl. Environ. Microbiol.] 2009 pBAD-cI-pOR1-gfp pBAD>+cI+pLAMBDA>+gfp+pCONST>+araC Lara gfp [C Lou et al] [Ribozyme-based insulator parts buffer synthetic circuits from genetic context] [Nature Biotechnology] 2012 pBAD-cI-pOR1-gfp pTAC>+cI+pLAMBDA>+gfp+pCONST>+lacI Lara gfp [C Lou et al] [Ribozyme-based insulator parts buffer synthetic circuits from genetic context] [Nature Biotechnology] 2012 pBAD-cI-pOR1-gfp pLAC>+cI+pLAMBDA>+gfp+pCONST>+lacI Lara gfp [C Lou et al] [Ribozyme-based insulator parts buffer synthetic circuits from genetic context] [Nature Biotechnology] 2012 pTACsym-yfp lacI+pCONST<+pTAC>+yfp IPTG yfp [C Lou et al] [Ribozyme-based insulator parts buffer synthetic circuits from genetic context] [Nature Biotechnology] 2012 pTACsym-McbR-pMcbR-yfp lacI+pCONST<+pTAC>+mcbR+pMCBR>+yfp IPTG yfp [C Lou et al] [Ribozyme-based insulator parts buffer synthetic circuits from genetic context] [Nature Biotechnology] 2012 pTACsym-R73delta-pMcbR-yfp lacI+pCONST<+pTAC>+R73delta+pF>+yfp IPTG yfp [C Lou et al] [Ribozyme-based insulator parts buffer synthetic circuits from genetic context] [Nature Biotechnology] 2012 pSal-yfp nahR+pCONST<+pSAL>+yfp Sal yfp [C Lou et al] [Ribozyme-based insulator parts buffer synthetic circuits from genetic context] [Nature Biotechnology] 2012 pSal-McbR-pMcbR-yfp nahR+pCONST<+pSAL>+mcbR+pMCBR>+yfp Sal yfp [C Lou et al] [Ribozyme-based insulator parts buffer synthetic circuits from genetic context] [Nature Biotechnology] 2012 pSal-R73delta-pMcbR-yfp nahR+pCONST<+pSAL>+R73delta+pF>+yfp Sal yfp [C Lou et al] [Ribozyme-based insulator parts buffer synthetic circuits from genetic context] [Nature Biotechnology] 2012 pBAD-rfp araC+pCONST<+pBAD>+rfp Lara rfp [TS Moon et al] [Genetic programs constructed from layered logic gates in single cells] Nature 2012 pTac-rfp lacI+pCONST<+pTAC>+rfp IPTG rfp [TS Moon et al] [Genetic programs constructed from layered logic gates in single cells] Nature 2012 pLux-rfp luxR+pCONST<+pLUX>+rfp AHL rfp [TS Moon et al] [Genetic programs constructed from layered logic gates in single cells] Nature 2012 pTet-rfp tetR+pCONST<+pTET>+rfp aTc rfp [TS Moon et al] [Genetic programs constructed from layered logic gates in single cells] Nature 2012 pTET-invF tetR+pCONST<+pTET>+invF aTc invF [TS Moon et al] [Genetic programs constructed from layered logic gates in single cells] Nature 2012 pBAD-sicA araC+pCONST<+pBAD>+sicA Lara sicA [TS Moon et al] [Genetic programs constructed from layered logic gates in single cells] Nature 2012 psicA-rfp psicA>+rfp sicA-invF rfp [TS Moon et al] [Genetic programs constructed from layered logic gates in single cells] Nature 2012 pTet-mxiE tetR+pCONST<+pTET>+mxiE aTc mxiE [TS Moon et al] [Genetic programs constructed from layered logic gates in single cells] Nature 2012 pBAD-ipgC araC+pCONST<+pBAD>+ipgC Lara ipgC [TS Moon et al] [Genetic programs constructed from layered logic gates in single cells] Nature 2012 pipaH-rfp pipaH>+rfp ipgC-mxiE rfp [TS Moon et al] [Genetic programs constructed from layered logic gates in single cells] Nature 2012 pTet-exsDA tetR+pCONST<+pTET>+exsDA aTc exsDA [TS Moon et al] [Genetic programs constructed from layered logic gates in single cells] Nature 2012 pLux-exsC luxR+pCONST<+pLUX>+exsC AHL exsC [TS Moon et al] [Genetic programs constructed from layered logic gates in single cells] Nature 2012 pexsC-rfp pexsC>+rfp exsC-exsDA rfp [TS Moon et al] [Genetic programs constructed from layered logic gates in single cells] Nature 2012 pACPc-invF tetR+pCONST<+pTET>+exsDA+XXX+exsC+pLUX<+pCONST>+luxR+TTT+invF+pexsC< aTc,AHL invF [TS Moon et al] [Genetic programs constructed from layered logic gates in single cells] Nature 2012 pXCPi-sicA ipgC+pBAD<+pCONST>+araC+XXX+pipaH>+sicA+TTT+lacI+pCONST<+pTAC>+mxiE Lara,IPTG sicA [TS Moon et al] [Genetic programs constructed from layered logic gates in single cells] Nature 2012