pOR10	pBAD>+yfp+pCONST>+araC	Lara	yfp	[A Tamsir et al]	[Robust multicellular computing using genetically encoded NOR gates and chemical wires]	Nature	2011
pOR20	pTET>+yfp+pCONST>+tetR	aTc	yfp	[A Tamsir et al]	[Robust multicellular computing using genetically encoded NOR gates and chemical wires]	Nature	2011
pOR30	pLAS>+yfp+pCONST>+lasR	HSL	yfp	[A Tamsir et al]	[Robust multicellular computing using genetically encoded NOR gates and chemical wires]	Nature	2011
pOR1020	pBADpTET>+yfp+pCONST>+araC+tetR	Lara,aTc	yfp	[A Tamsir et al]	[Robust multicellular computing using genetically encoded NOR gates and chemical wires]	Nature	2011
pOR1030	pBADpLAS>+yfp+pCONST>+araC+lasR	Lara,HSL	yfp	[A Tamsir et al]	[Robust multicellular computing using genetically encoded NOR gates and chemical wires]	Nature	2011
pOR2030	pTETpLAS>+yfp+pCONST>+lasR+tetR	HSL,aTc	yfp	[A Tamsir et al]	[Robust multicellular computing using genetically encoded NOR gates and chemical wires]	Nature	2011
pNOR1020	pBADpTET>+cI+pCONST>+araC+tetR	Lara,aTc	cI	[A Tamsir et al]	[Robust multicellular computing using genetically encoded NOR gates and chemical wires]	Nature	2011
pNOR1030	pBADpLAS>+cI+pCONST>+araC+lasR	Lara,HSL	cI	[A Tamsir et al]	[Robust multicellular computing using genetically encoded NOR gates and chemical wires]	Nature	2011
pNOR2030	pTETpLAS>+cI+pCONST>+lasR+tetR	HSL,aTc	cI	[A Tamsir et al]	[Robust multicellular computing using genetically encoded NOR gates and chemical wires]	Nature	2011
pNOR40	pRHL>+cI+pCONST>+rhlR	C4HSL	cI	[A Tamsir et al]	[Robust multicellular computing using genetically encoded NOR gates and chemical wires]	Nature	2011
pPcI-yfp	pLAMBDA>+yfp	cI	yfp	[A Tamsir et al]	[Robust multicellular computing using genetically encoded NOR gates and chemical wires]	Nature	2011
pcI-lasI	pLAMBDA>+lasI	cI	HSL	[A Tamsir et al]	[Robust multicellular computing using genetically encoded NOR gates and chemical wires]	Nature	2011
pcI-rhlI	pLAMBDA>+rhlI	cI	C4HSL	[A Tamsir et al]	[Robust multicellular computing using genetically encoded NOR gates and chemical wires]	Nature	2011
pBW10xlac-gfp	pLAC>+gfp+pCONST>+lacI	IPTG	gfp	[B Wang et al]	[Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology]	[Nature communications]	2011
pBW20xara-gfp	araC+pCONST<+pBAD>+gfp	Lara	gfp	[B Wang et al]	[Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology]	[Nature communications]	2011
pBW30xlux-gfp	pTET>+luxR+pLUX>+gfp	AHL	gfp	[B Wang et al]	[Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology]	[Nature communications]	2011
pBW115lac-hrpR	pLAC>+hrpR+pCONST>+lacI	IPTG	hrpR	[B Wang et al]	[Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology]	[Nature communications]	2011
pBW213ara-hrpS	araC+pCONST<+pBAD>+hrpS	Lara	hrpS	[B Wang et al]	[Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology]	[Nature communications]	2011
pBW313lux-hrpR	pTET>+luxR+pLUX>+hrpR	AHL	hrpR	[B Wang et al]	[Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology]	[Nature communications]	2011
PBW12xlac-cIgfp	pLAC>+cI+pLAMBDA>+gfp+pCONST>+lacI	IPTG	gfp	[B Wang et al]	[Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology]	[Nature communications]	2011
pBW400hrpL-gfp	phrpL>+gfp	hrpR,hrpS	gfp	[B Wang et al]	[Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology]	[Nature communications]	2011
PBW412hrpL-cIgfp	phrpL>+cI+pLAMBDA>+gfp	hrpR,hrpS	gfp	[B Wang et al]	[Engineering modular and orthogonal genetic logic gates for robust digital-like synthetic biology]	[Nature communications]	2011
pSupDLuxR	luxR+pCONST<+pLUX>+supD	AHL	supD	[JC Anderson et al]	[Environmental signal integration by a modular AND gate]	[Molecular Systems Biology]	2007
pAC-SalSer914	nahR+pCONST<+pSAL>+supD	Sal	supD	[JC Anderson et al]	[Environmental signal integration by a modular AND gate]	[Molecular Systems Biology]	2007
pBAC874t	pTET>+gfp	tetR	gfp	[JC Anderson et al]	[Environmental signal integration by a modular AND gate]	[Molecular Systems Biology]	2007
pBACxxx	araC+pCONST<+pBAD>+gfp	Lara	gfp	[JC Anderson et al]	[Environmental signal integration by a modular AND gate]	[Molecular Systems Biology]	2007
pBACr-Mgr901	pmgrB>+gfp	Mg2+	gfp	[JC Anderson et al]	[Environmental signal integration by a modular AND gate]	[Molecular Systems Biology]	2007
pBACr-AraT7940	araC+pCONST<+pBAD>+T7ptag	Lara	T7ptag	[JC Anderson et al]	[Environmental signal integration by a modular AND gate]	[Molecular Systems Biology]	2007
pBACr-Mgr940	pmgrB>+T7ptag	Mg2+	T7ptag	[JC Anderson et al]	[Environmental signal integration by a modular AND gate]	[Molecular Systems Biology]	2007
pBACr-Mgr951	pT7>+gfp+pmgrB>+T7ptag	Mg2+,supD	gfp	[JC Anderson et al]	[Environmental signal integration by a modular AND gate]	[Molecular Systems Biology]	2007
pBR939B	pT7>+gfp	T7ptag,supD	gfp	[JC Anderson et al]	[Environmental signal integration by a modular AND gate]	[Molecular Systems Biology]	2007
pFNK-202-eyfp-qscxxx	rhlR+pCONST<+pRHL>+yfp	C4HSL	yfp	[D Karig et al]	[Signal-Amplifying Genetic Circuit Enables In Vivo Observation of Weak Promoter Activation in the Rhl Quorum Sensing System]	[Biotechnology and bioengineering]	2005
pMUX-204-qscxxx	rhlR+pCONST<+pRHL>+cI	C4HSL	cI	[D Karig et al]	[Signal-Amplifying Genetic Circuit Enables In Vivo Observation of Weak Promoter Activation in the Rhl Quorum Sensing System]	[Biotechnology and bioengineering]	2005
pINV-107-mutx	pLAMBDA>+yfp	cI	yfp	[D Karig et al]	[Signal-Amplifying Genetic Circuit Enables In Vivo Observation of Weak Promoter Activation in the Rhl Quorum Sensing System]	[Biotechnology and bioengineering]	2005
pLD	pLUX>+cI+pLAMBDA>+lacI	luxR,AHL	lacI	[S Basu et al]	[A synthetic multicelluar system for programmed pattern formation]	Nature	2004
pSND	pTET>+luxI	EMPTY	AHL	[S Basu et al]	[A synthetic multicelluar system for programmed pattern formation]	Nature	2004
pHD-gfp	lacI+pLUX<+pCONST>+luxR+pLAC>+gfp	AHL	gfp	[S Basu et al]	[A synthetic multicelluar system for programmed pattern formation]	Nature	2004
pHD-rfp	lacI+pLUX<+pCONST>+luxR+pLAC>+rfp	AHL	rfp	[S Basu et al]	[A synthetic multicelluar system for programmed pattern formation]	Nature	2004
pCFP	lacI+pCONST<+pLAC>+cfp	IPTG	cfp	[S Basu et al]	[A synthetic multicelluar system for programmed pattern formation]	Nature	2004
pRFP	lacI+pCONST<+pLAC>+rfp	IPTG	rfp	[S Basu et al]	[A synthetic multicelluar system for programmed pattern formation]	Nature	2004
pMKN7a	pLAC>+gfp	lacI	gfp	[TS Gardner et al]	[Construction of a genetic toggle switch in Escherichia coli]	Nature	2000
pBAG10x	pTET>+gfp	tetR	gfp	[TS Gardner et al]	[Construction of a genetic toggle switch in Escherichia coli]	Nature	2000
pBRTxxx	pLAMBDA>+gfp	cI	gfp	[TS Gardner et al]	[Construction of a genetic toggle switch in Escherichia coli]	Nature	2000
pTAK102-103a	lacI+pLAMBDA<+pLAC>+gfp	cI	gfp	[TS Gardner et al]	[Construction of a genetic toggle switch in Escherichia coli]	Nature	2000
pTAK106-107	gfp+pLAMBDA<+pLAC>+cI	lacI	gfp	[TS Gardner et al]	[Construction of a genetic toggle switch in Escherichia coli]	Nature	2000
pIKE108-110	gfp+pTET<+pLAC>+tetR	lacI	gfp	[TS Gardner et al]	[Construction of a genetic toggle switch in Escherichia coli]	Nature	2000
pTAK117-132	lacI+pLAMBDA<+pLAC>+cI+gfp	IPTG	gfp	[TS Gardner et al]	[Construction of a genetic toggle switch in Escherichia coli]	Nature	2000
pIKE107	lacI+pTET<+pLAC>+tetR+gfp	IPTG,aTc	gfp	[TS Gardner et al]	[Construction of a genetic toggle switch in Escherichia coli]	Nature	2000
pJS167	pLAC/BAD>+araC+pLAC/BAD>+gfp	lacI,Lara	gfp	[J Stricker et al]	[A fast, robust and tunable synthetic gene oscillator]	Nature	2008
pJS169	pLAC/BAD>+lacI	lacI,Lara,araC	lacI	[J Stricker et al]	[A fast, robust and tunable synthetic gene oscillator]	Nature	2008
BBa_F2620	pTET>+luxR+pLUX>	AHL	pLUX	[B Canton et al]	[Refinement and standardization of synthetic biological parts and devices]	[Nature Biotechnology]	2008
pJT108	pompC>+lacZ	LIGHT	lacZ	[JJ Tabor et al]	[A Synthetic Genetic Edge Detection Program]	Cell	2009
pJT105	pLUX/LAMBDA>+lacZ+pompC>+luxI+pTET>+luxR	LIGHT,cI	lacZ	[JJ Tabor et al]	[A Synthetic Genetic Edge Detection Program]	Cell	2009
pJT106	pLUX/LAMBDA>+lacZ+pompC>+cI	LIGHT	lacZ	[JJ Tabor et al]	[A Synthetic Genetic Edge Detection Program]	Cell	2009
pEDL3	pLUX/LAMBDA>+lacZ+pompC>+cI+luxI+pTET>+luxR	LIGHT	lacZ	[JJ Tabor et al]	[A Synthetic Genetic Edge Detection Program]	Cell	2009
pLuxRI2	pLAC/BAD>+luxR+luxI	EMPTY	AHL-luxR	[L You et al]	[Programmed population control by cell–cell communication and regulated killing]	Nature	2004
pluxCcdB3	pLUX>+lacZalpha-ccdB	AHL,luxR	lacZalpha-ccdB	[L You et al]	[Programmed population control by cell–cell communication and regulated killing]	Nature	2004
predator1-MG1655	ccdA+pLUX<+pTET>+luxR+lasI	AHL	ccdA	[FK Balagadde et al]	[A synthetic Escherichia coli predator–prey ecosystem]	[Molecular Systems Biology]	2008
predator2-MG1655	pLAC/BAD>+lacZalpha-ccdB+pTET>+gfp	EMPTY	lacZalpha-ccdB,gfp	[FK Balagadde et al]	[A synthetic Escherichia coli predator–prey ecosystem]	[Molecular Systems Biology]	2008
prey1-Top10F	lacZalpha-ccdB+pLUX<+pLAC/BAD>+lasR+luxI	HSL	lacZalpha-ccdB	[FK Balagadde et al]	[A synthetic Escherichia coli predator–prey ecosystem]	[Molecular Systems Biology]	2008
prey2-Top10F	pTET>+gfp	tetR	gfp	[FK Balagadde et al]	[A synthetic Escherichia coli predator–prey ecosystem]	[Molecular Systems Biology]	2008
predator-Top10F	pLAC/BAD>+lacZalpha-ccdB	EMPTY	lacZalpha-ccdB	[FK Balagadde et al]	[A synthetic Escherichia coli predator–prey ecosystem]	[Molecular Systems Biology]	2008
pBR322-ptrc-lexA	pCONST>+lacI+pLAC>+lexA	IPTG,nalidixic-acid	lexA	[RS Rocha et al]	[Implementing an OR –NOT (ORN) logic gate with components of the SOS regulatory network of Escherichia coli]	[Molecular  BioSystems]	2011
pRV2-SOS	pSOS>+gfp	lexA	gfp	[RS Rocha et al]	[Implementing an OR –NOT (ORN) logic gate with components of the SOS regulatory network of Escherichia coli]	[Molecular  BioSystems]	2011
pZE21-MCSI-pZE12-luc	pLAC>+tetR+pLAMBDA>+lacI+pTET>+cI	EMPTY	EMPTY	[MB Elowitz et al]	[A synthetic oscillatory network of transcriptional regulators]	Nature	2000
pZE21-MCS1-gfp	pTET>+gfp	tetR	gfp	[MB Elowitz et al]	[A synthetic oscillatory network of transcriptional regulators]	Nature	2000
PLuxI-Tet-8	pTET>+luxI	EMPTY	AHL	[S Basu et al]	[Spatiotemporal control of gene expression with pulse-generating networks]	PNAS	2004
pLTSUB-202-RBSH	luxR+pCONST<+pLUX>+cI+cfp	AHL	cfp	[S Basu et al]	[Spatiotemporal control of gene expression with pulse-generating networks]	PNAS	2004
pPSSUB-101-mut4	pLUX/LAMBDA>+gfp	AHL,luxR,cI	gfp	[S Basu et al]	[Spatiotemporal control of gene expression with pulse-generating networks]	PNAS	2004
pCRT1	pCONST>+tetR+pTET>+yfp	aTc	yfp	[S Hooshangi et al]	[Ultrasensitivity and noise propagation in a synthetic transcriptional cascade]	PNAS	2004
pCRT2	pCONST>+tetR+pTET>+lacI+pLAC>+yfp	aTc	yfp	[S Hooshangi et al]	[Ultrasensitivity and noise propagation in a synthetic transcriptional cascade]	PNAS	2004
pCRT3	pCONST>+tetR+pTET>+lacI+pLAC>+cI+pLAMBDA>+yfp	aTc	yfp	[S Hooshangi et al]	[Ultrasensitivity and noise propagation in a synthetic transcriptional cascade]	PNAS	2004
pTara:500	araC+pCONST<+pBAD>+T7	Lara	T7	[Shis, D. L., & Bennett, M. R.]	[Library of synthetic transcriptional AND gates built with split T7 RNA polymerase mutants]	PNAS	2013
pTSara-N	araC+pCONST<+pBAD>+T7-N	Lara	T7-N	[Shis, D. L., & Bennett, M. R.]	[Library of synthetic transcriptional AND gates built with split T7 RNA polymerase mutants]	PNAS	2013
pTSara-C	araC+pCONST<+pBAD>+T7-C	Lara	T7-C	[Shis, D. L., & Bennett, M. R.]	[Library of synthetic transcriptional AND gates built with split T7 RNA polymerase mutants]	PNAS	2013
pTSlb	T7-N+pLAC<+pBAD>+T7-C	lacI,Lara-araC	T7-C-T7-N	[Shis, D. L., & Bennett, M. R.]	[Library of synthetic transcriptional AND gates built with split T7 RNA polymerase mutants]	PNAS	2013
pET:NNNN:GFP	gfp+pT7<+pCONST>+lacI	T7-C-T7-N	gfp,lacI	[Shis, D. L., & Bennett, M. R.]	[Library of synthetic transcriptional AND gates built with split T7 RNA polymerase mutants]	PNAS	2013
PluxI-lacO-GFPmut2	pLUX/LAC>+gfp	lacI,AHL-luxR	gfp	[DJ Sayut et al]	[Construction and enhancement of a minimal genetic and logic gate]	[Appl. Environ. Microbiol.]	2009
pBAD-cI-pOR1-gfp	pBAD>+cI+pLAMBDA>+gfp+pCONST>+araC	Lara	gfp	[C Lou et al]	[Ribozyme-based insulator parts buffer synthetic circuits from genetic context]	[Nature Biotechnology]	2012
pBAD-cI-pOR1-gfp	pTAC>+cI+pLAMBDA>+gfp+pCONST>+lacI	Lara	gfp	[C Lou et al]	[Ribozyme-based insulator parts buffer synthetic circuits from genetic context]	[Nature Biotechnology]	2012
pBAD-cI-pOR1-gfp	pLAC>+cI+pLAMBDA>+gfp+pCONST>+lacI	Lara	gfp	[C Lou et al]	[Ribozyme-based insulator parts buffer synthetic circuits from genetic context]	[Nature Biotechnology]	2012
pTACsym-yfp	lacI+pCONST<+pTAC>+yfp	IPTG	yfp	[C Lou et al]	[Ribozyme-based insulator parts buffer synthetic circuits from genetic context]	[Nature Biotechnology]	2012
pTACsym-McbR-pMcbR-yfp	lacI+pCONST<+pTAC>+mcbR+pMCBR>+yfp	IPTG	yfp	[C Lou et al]	[Ribozyme-based insulator parts buffer synthetic circuits from genetic context]	[Nature Biotechnology]	2012
pTACsym-R73delta-pMcbR-yfp	lacI+pCONST<+pTAC>+R73delta+pF>+yfp	IPTG	yfp	[C Lou et al]	[Ribozyme-based insulator parts buffer synthetic circuits from genetic context]	[Nature Biotechnology]	2012
pSal-yfp	nahR+pCONST<+pSAL>+yfp	Sal	yfp	[C Lou et al]	[Ribozyme-based insulator parts buffer synthetic circuits from genetic context]	[Nature Biotechnology]	2012
pSal-McbR-pMcbR-yfp	nahR+pCONST<+pSAL>+mcbR+pMCBR>+yfp	Sal	yfp	[C Lou et al]	[Ribozyme-based insulator parts buffer synthetic circuits from genetic context]	[Nature Biotechnology]	2012
pSal-R73delta-pMcbR-yfp	nahR+pCONST<+pSAL>+R73delta+pF>+yfp	Sal	yfp	[C Lou et al]	[Ribozyme-based insulator parts buffer synthetic circuits from genetic context]	[Nature Biotechnology]	2012
pBAD-rfp	araC+pCONST<+pBAD>+rfp	Lara	rfp	[TS Moon et al]	[Genetic programs constructed from layered logic gates in single cells]	Nature	2012
pTac-rfp	lacI+pCONST<+pTAC>+rfp	IPTG	rfp	[TS Moon et al]	[Genetic programs constructed from layered logic gates in single cells]	Nature	2012
pLux-rfp	luxR+pCONST<+pLUX>+rfp	AHL	rfp	[TS Moon et al]	[Genetic programs constructed from layered logic gates in single cells]	Nature	2012
pTet-rfp	tetR+pCONST<+pTET>+rfp	aTc	rfp	[TS Moon et al]	[Genetic programs constructed from layered logic gates in single cells]	Nature	2012
pTET-invF	tetR+pCONST<+pTET>+invF	aTc	invF	[TS Moon et al]	[Genetic programs constructed from layered logic gates in single cells]	Nature	2012
pBAD-sicA	araC+pCONST<+pBAD>+sicA	Lara	sicA	[TS Moon et al]	[Genetic programs constructed from layered logic gates in single cells]	Nature	2012
psicA-rfp	psicA>+rfp	sicA-invF	rfp	[TS Moon et al]	[Genetic programs constructed from layered logic gates in single cells]	Nature	2012
pTet-mxiE	tetR+pCONST<+pTET>+mxiE	aTc	mxiE	[TS Moon et al]	[Genetic programs constructed from layered logic gates in single cells]	Nature	2012
pBAD-ipgC	araC+pCONST<+pBAD>+ipgC	Lara	ipgC	[TS Moon et al]	[Genetic programs constructed from layered logic gates in single cells]	Nature	2012
pipaH-rfp	pipaH>+rfp	ipgC-mxiE	rfp	[TS Moon et al]	[Genetic programs constructed from layered logic gates in single cells]	Nature	2012
pTet-exsDA	tetR+pCONST<+pTET>+exsDA	aTc	exsDA	[TS Moon et al]	[Genetic programs constructed from layered logic gates in single cells]	Nature	2012
pLux-exsC	luxR+pCONST<+pLUX>+exsC	AHL	exsC	[TS Moon et al]	[Genetic programs constructed from layered logic gates in single cells]	Nature	2012
pexsC-rfp	pexsC>+rfp	exsC-exsDA	rfp	[TS Moon et al]	[Genetic programs constructed from layered logic gates in single cells]	Nature	2012
pACPc-invF	tetR+pCONST<+pTET>+exsDA+XXX+exsC+pLUX<+pCONST>+luxR+TTT+invF+pexsC<	aTc,AHL	invF	[TS Moon et al]	[Genetic programs constructed from layered logic gates in single cells]	Nature	2012
pXCPi-sicA	ipgC+pBAD<+pCONST>+araC+XXX+pipaH>+sicA+TTT+lacI+pCONST<+pTAC>+mxiE	Lara,IPTG	sicA	[TS Moon et al]	[Genetic programs constructed from layered logic gates in single cells]	Nature	2012
