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01/17 |
Conf: 99999999999999999999999999999999999 Pred: CCCCCCEEEEEEEECCCCEEEEEEECCCHHHHHHH AA: ELTPAVTTYKLVINGKTLKGETTTKAVDAETAEKA Conf: 99999999999999999999999999999999999 Pred: HHHHHHHCCCEEEEEEECCCEEEEEEEECCCCCCC AA: FKQYANDNGVDGVWTYDDATKTFTVTEMVTEVPVA |
| A prediction file for protein 1PGX in FASTA format. The third line defines the protein's amino acid residue sequence using the standard one-letter abbreviations (A - Alanine, ..., V - Valine). The second line defines secondary structure types for each amino acid (H - alpha helix, E - beta strand, C - coil region). The first line gives confidence values for each prediction (1 - lowest, 9 - highest). The confidence value line is currently not used by ProtoShop. |