Patrice Koehl
Department of Computer Science
Genome Center
Room 4319, Genome Center, GBSF
451 East Health Sciences Drive
University of California
Davis, CA 95616
Phone: (530) 754 5121
koehl@cs.ucdavis.edu
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| Patrice Koehl |
Curriculum Vitae |
Download: PDF file |
| 2014 | Founding Director, Data Science Initiative, University of California, Davis |
| 2010 | Visiting Professor, Department of Biological Sciences, National University of Singapore |
| 2008 | Associate Director (Bioinformatics), Genome Center, University of California, Davis |
| 2008 | Professor, Department of Computer Science, University of California, Davis | 2004 | Associate Professor, Department of Computer Science, University of California, Davis |
| 1995 | Habilitation à diriger les recherches, Louis Pasteur University, Strasbourg, France |
| 1989 | PhD in Biophysics (Molecular Biology and NMR spectroscopy), Louis Pasteur University, Strasbourg, France |
| 1989 | Diplôme d'ingénieur de l'Ecole Centrale des Arts et Manufactures de Paris (equivalent to a M.S. in Engineering); Major: Bioengineering |
| 2006 | Alfred P. Sloan fellow |
| 1997 | Bronze Medal from the Centre National de la Recherche Scientifique, France (Young Investigator Award) |
| 2014-present | Founding Director, Data Science Initiative, University of California, Davis |
| 2010-present | Visiting Professor, Department of Biological Sciences, National University of Singapore |
| 2008-present | Professor, Department of Computer Science, University of California, Davis |
| 2008-2014 | Associate Director (Bioinformatics), Genome Center, University of California, Davis |
| 2004-2008 | Associate Professor, Department of Computer Science, University of California, Davis |
| 2001-2004 | Senior research associate, Department of Structural Biology, Stanford University |
| 1997-2001 | Visiting research associate, Department of Structural Biology, Stanford University |
| Summer 1991 | Visiting Scientist at the Molecular Modeling Laboratory of the University of Kyoto, Japan (sponsored by the HSFP) |
| Summer 1990 | Visiting Scientist at the Stanford Magnetic Resonance Laboratory, Stanford University (sponsored by the UICC) |
| 1989-present | Senior research associate (chargé de recherche 1), CNRS, France (on leave of absence since 1997) |
| 1986-1989 | Doctoral Research at the University Louis Pasteur of Strasbourg in the Molecular and Structural Carcinogenesis and Mutagenesis Group directed by Dr. R.P.P Fuchs. Supervisor: Prof. Jean-Francois Lefèvre; Defense: April 11, 1989 |
| 1984-1986 | Staff Scientist at the Lawrence Berkeley Laboratory, Berkeley, California, in the Biophysics Laboratory directed by Dr. A. Chatterjee |
| 2010-present | Visiting Professor, National University of Singapore. I serve as instructor in two Bioinformatics undergraduate courses in the Biochemistry Department, as well as in one graduate style on structural biology, in the Department of Biological Sciences. I created and teach a new graduate module on Scientific Computing applied to Biology, focusing on data analysis |
| 2004-present | Professor, UC Davis, Computer Science Department; I teach four stylees (quarter) each year, both at the graduate and undergraduate levels. I also participate as an instructor in summer programs for high school students |
| 1994-1997 | Lecturer, "The Fourier transform and its applications", Université Louis Pasteur, Strasbourg, Physics department (graduate level) |
| 1992-1997 | Lecturer, "Distance Geometry and protein structure", Université Louis Pasteur, Strasbourg, Biophysics department (graduate level) |
| 1988-1994 | Lecturer, "Introduction to computer science for biologists", Ecole Supérieure de Biotechnologie de Strasbourg (undergraduate level) |
| 1988-1991 | Lecturer, "Calculus", Ecole Supérieure de Biotechnologie de Strasbourg (undergraduate level) |
| 1989 | Lecturer, "Probability and Statistics", Université Louis Pasteur, Strasbourg, Biology department (undergraduate level) |
| Grants | Ad-hoc reviewer for NIH (Biophysics) and NSF (computer science) panels. External reviewer for the European Union CORDIS program (FP6 & FP7), and ERC program. External reviewer for the Israeli Science Foundation |
| Journals | Nature, Nature Chemical Biology, Journal of Molecular Biology, Journal of Computational Biology, Journal of Magnetic Resonance, Journal of Biological NMR, Journal de Chimie Physique, Nucleic Acids Research, Proteins: Struct. Func. Genet., Protein Science, Proc. Natl. Acad. Sci. (USA), Structure, BMC Bioinformatics |
| Member | Faculty of 1000 (Protein folding) |
| Traveling, reading, writing, hiking, running |
| Page last modified 16 September 2014 | http://www.cs.ucdavis.edu/~koehl/ |